STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG89944.1Glycosyltransferase involved in cell wall bisynthesis. (366 aa)    
Predicted Functional Partners:
SFG89922.1
Glucose-1-phosphate thymidylyltransferase.
  
 
 0.882
SFG89870.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.841
SFG89905.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.841
SFG97796.1
Maltooligosyltrehalose trehalohydrolase.
   
 0.824
SFG97818.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family.
   
 0.824
SFF92223.1
ATP-dependent DNA helicase, RecQ family.
    
 
 0.803
SFG89963.1
Hypothetical protein.
     
 0.796
SFG89825.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.789
SFG35093.1
Nucleotidyl transferase.
 
 0.750
SFG89982.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.741
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.