STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG92242.1Integrase core domain-containing protein. (234 aa)    
Predicted Functional Partners:
SFG92222.1
Integrase core domain-containing protein.
     0.994
SFG92204.1
Type II secretory pathway, component ExeA (predicted ATPase).
 
   
 0.955
SFG92184.1
Hypothetical protein.
       0.689
SFH38815.1
Hypothetical protein.
 
  
 0.444
SFH06982.1
Transposase, IS605 OrfB family, central region.
  
     0.437
SFG15778.1
Hypothetical protein.
  
     0.422
SFH38827.1
Transposase DDE domain-containing protein.
 
  
 0.420
SFG37533.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.