STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG92352.1P22 coat protein-gene protein 5. (374 aa)    
Predicted Functional Partners:
SFG92293.1
Phage portal protein, SPP1 family.
 
     0.785
SFG92261.1
Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein.
 
     0.774
SFG13600.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
     0.751
SFG92333.1
Protein of unknown function.
       0.744
SFG92133.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.629
SFG92368.1
Hypothetical protein.
       0.614
SFG92384.1
Phage gp6-like head-tail connector protein.
       0.611
SFG92401.1
Hypothetical protein.
       0.611
SFG92415.1
Hypothetical protein.
       0.601
SFG92314.1
Hypothetical protein.
       0.510
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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