STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG93306.1DNA-binding transcriptional regulator, GntR family. (223 aa)    
Predicted Functional Partners:
SFH27439.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.784
SFH02658.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.782
SFG09358.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.776
SFG08496.1
DNA-binding transcriptional regulator, GntR family.
  
     0.740
SFG93319.1
Formate C-acetyltransferase.
       0.733
SFH38903.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.715
SFG93335.1
Pyruvate formate lyase activating enzyme.
       0.623
SFF98637.1
Acetolactate synthase, small subunit.
   
    0.441
SFH03964.1
Acetolactate synthase, small subunit.
   
    0.441
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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