STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG94128.12,4-dienoyl-CoA reductase. (363 aa)    
Predicted Functional Partners:
SFG46764.1
Electron transfer flavoprotein beta subunit.
  
 
 0.816
SFG46742.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.726
SFH00831.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.726
SFG40854.1
GXGXG motif-containing protein.
    
 0.644
SFG94112.1
MerR HTH family regulatory protein.
  
    0.570
SFH02467.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
 
    0.567
SFG94527.1
Transcriptional regulator, CarD family.
   
    0.514
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.508
SFH02825.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
    
 0.496
SFG14765.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
  
 0.485
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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