STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG94258.1Cystathionine beta-lyase. (379 aa)    
Predicted Functional Partners:
SFH29914.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 0.966
SFH41982.1
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.942
SFG79217.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.936
SFG36406.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 0.935
SFF97123.1
Hypothetical protein.
 
   
  0.930
SFG29534.1
Cystathione beta-lyase.
 
 
 0.908
SFG47714.1
Cysteine synthase.
  
 0.907
SFF95068.1
Homoserine dehydrogenase.
  
 
 0.865
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.851
SFG27619.1
Hypothetical protein.
  
 
 0.842
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.