Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF99373.1 | SFG48584.1 | SAMN05660649_00386 | SAMN05660649_01799 | N-acetylmuramoyl-L-alanine amidase. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.890 |
SFF99373.1 | SFG65752.1 | SAMN05660649_00386 | SAMN05660649_02324 | N-acetylmuramoyl-L-alanine amidase. | Uridine kinase. | 0.827 |
SFF99373.1 | SFG97651.1 | SAMN05660649_00386 | SAMN05660649_03354 | N-acetylmuramoyl-L-alanine amidase. | Protein of unknown function. | 0.614 |
SFF99373.1 | guaA | SAMN05660649_00386 | SAMN05660649_00236 | N-acetylmuramoyl-L-alanine amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.898 |
SFF99373.1 | guaB | SAMN05660649_00386 | SAMN05660649_01776 | N-acetylmuramoyl-L-alanine amidase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.797 |
SFG06066.1 | SFG97610.1 | SAMN05660649_00520 | SAMN05660649_03352 | Uncharacterized membrane protein YhiD, involved in acid resistance. | VTC domain-containing protein. | 0.869 |
SFG06066.1 | SFG97651.1 | SAMN05660649_00520 | SAMN05660649_03354 | Uncharacterized membrane protein YhiD, involved in acid resistance. | Protein of unknown function. | 0.625 |
SFG48584.1 | SFF99373.1 | SAMN05660649_01799 | SAMN05660649_00386 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | N-acetylmuramoyl-L-alanine amidase. | 0.890 |
SFG48584.1 | SFG65752.1 | SAMN05660649_01799 | SAMN05660649_02324 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Uridine kinase. | 0.702 |
SFG48584.1 | SFG97651.1 | SAMN05660649_01799 | SAMN05660649_03354 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Protein of unknown function. | 0.606 |
SFG48584.1 | guaA | SAMN05660649_01799 | SAMN05660649_00236 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.451 |
SFG48584.1 | guaB | SAMN05660649_01799 | SAMN05660649_01776 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.559 |
SFG65752.1 | SFF99373.1 | SAMN05660649_02324 | SAMN05660649_00386 | Uridine kinase. | N-acetylmuramoyl-L-alanine amidase. | 0.827 |
SFG65752.1 | SFG48584.1 | SAMN05660649_02324 | SAMN05660649_01799 | Uridine kinase. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.702 |
SFG65752.1 | SFG97651.1 | SAMN05660649_02324 | SAMN05660649_03354 | Uridine kinase. | Protein of unknown function. | 0.628 |
SFG65752.1 | guaA | SAMN05660649_02324 | SAMN05660649_00236 | Uridine kinase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.900 |
SFG65752.1 | guaB | SAMN05660649_02324 | SAMN05660649_01776 | Uridine kinase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.666 |
SFG76235.1 | SFG97651.1 | SAMN05660649_02608 | SAMN05660649_03354 | Putative adhesin. | Protein of unknown function. | 0.683 |
SFG97575.1 | SFG97610.1 | SAMN05660649_03350 | SAMN05660649_03352 | His Kinase A (phospho-acceptor) domain-containing protein. | VTC domain-containing protein. | 0.704 |
SFG97575.1 | SFG97632.1 | SAMN05660649_03350 | SAMN05660649_03353 | His Kinase A (phospho-acceptor) domain-containing protein. | Protein of unknown function. | 0.729 |
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