Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFG28951.1 | SFG76257.1 | SAMN05660649_01289 | SAMN05660649_02609 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | NitT/TauT family transport system substrate-binding protein. | 0.566 |
| SFG28951.1 | SFG99867.1 | SAMN05660649_01289 | SAMN05660649_03467 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation protein YabP. | 0.766 |
| SFG28951.1 | SFG99900.1 | SAMN05660649_01289 | SAMN05660649_03468 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore cortex biosynthesis protein YabQ. | 0.643 |
| SFG28951.1 | SFH35174.1 | SAMN05660649_01289 | SAMN05660649_04860 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative sporulation protein YtxC. | 0.569 |
| SFG76257.1 | SFG28951.1 | SAMN05660649_02609 | SAMN05660649_01289 | NitT/TauT family transport system substrate-binding protein. | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.566 |
| SFG76257.1 | SFG95603.1 | SAMN05660649_02609 | SAMN05660649_03320 | NitT/TauT family transport system substrate-binding protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.525 |
| SFG76257.1 | SFG99900.1 | SAMN05660649_02609 | SAMN05660649_03468 | NitT/TauT family transport system substrate-binding protein. | Spore cortex biosynthesis protein YabQ. | 0.662 |
| SFG76257.1 | SFH35174.1 | SAMN05660649_02609 | SAMN05660649_04860 | NitT/TauT family transport system substrate-binding protein. | Putative sporulation protein YtxC. | 0.435 |
| SFG88346.1 | SFG95603.1 | SAMN05660649_03005 | SAMN05660649_03320 | Peptidase MA superfamily protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.681 |
| SFG88346.1 | SFG99900.1 | SAMN05660649_03005 | SAMN05660649_03468 | Peptidase MA superfamily protein. | Spore cortex biosynthesis protein YabQ. | 0.722 |
| SFG88346.1 | SFH31685.1 | SAMN05660649_03005 | SAMN05660649_04715 | Peptidase MA superfamily protein. | Putative zinc-finger. | 0.634 |
| SFG88346.1 | SFH35174.1 | SAMN05660649_03005 | SAMN05660649_04860 | Peptidase MA superfamily protein. | Putative sporulation protein YtxC. | 0.528 |
| SFG95603.1 | SFG76257.1 | SAMN05660649_03320 | SAMN05660649_02609 | Sporulation lipoprotein, YhcN/YlaJ family. | NitT/TauT family transport system substrate-binding protein. | 0.525 |
| SFG95603.1 | SFG88346.1 | SAMN05660649_03320 | SAMN05660649_03005 | Sporulation lipoprotein, YhcN/YlaJ family. | Peptidase MA superfamily protein. | 0.681 |
| SFG95603.1 | SFG99900.1 | SAMN05660649_03320 | SAMN05660649_03468 | Sporulation lipoprotein, YhcN/YlaJ family. | Spore cortex biosynthesis protein YabQ. | 0.718 |
| SFG99781.1 | SFG99803.1 | SAMN05660649_03463 | SAMN05660649_03464 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | 0.923 |
| SFG99781.1 | SFG99867.1 | SAMN05660649_03463 | SAMN05660649_03467 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Sporulation protein YabP. | 0.562 |
| SFG99781.1 | SFG99900.1 | SAMN05660649_03463 | SAMN05660649_03468 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Spore cortex biosynthesis protein YabQ. | 0.793 |
| SFG99803.1 | SFG99781.1 | SAMN05660649_03464 | SAMN05660649_03463 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.923 |
| SFG99803.1 | SFG99846.1 | SAMN05660649_03464 | SAMN05660649_03466 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Stage II sporulation protein D. | 0.434 |
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