Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFG06514.1 | SFH00253.1 | SAMN05660649_00538 | SAMN05660649_03485 | Transcriptional regulator, AraC family. | Helix-turn-helix domain-containing protein. | 0.586 |
| SFG54816.1 | SFG92863.1 | SAMN05660649_01943 | SAMN05660649_03172 | Transcriptional regulator, AraC family. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.404 |
| SFG54816.1 | SFH00253.1 | SAMN05660649_01943 | SAMN05660649_03485 | Transcriptional regulator, AraC family. | Helix-turn-helix domain-containing protein. | 0.644 |
| SFG54816.1 | SFH29072.1 | SAMN05660649_01943 | SAMN05660649_04599 | Transcriptional regulator, AraC family. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.541 |
| SFG68940.1 | SFG92863.1 | SAMN05660649_02364 | SAMN05660649_03172 | AraC family transcriptional regulator. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.558 |
| SFG68940.1 | SFH00253.1 | SAMN05660649_02364 | SAMN05660649_03485 | AraC family transcriptional regulator. | Helix-turn-helix domain-containing protein. | 0.663 |
| SFG68940.1 | SFH29072.1 | SAMN05660649_02364 | SAMN05660649_04599 | AraC family transcriptional regulator. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.611 |
| SFG68940.1 | sigA | SAMN05660649_02364 | SAMN05660649_03947 | AraC family transcriptional regulator. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.874 |
| SFG92863.1 | SFG54816.1 | SAMN05660649_03172 | SAMN05660649_01943 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Transcriptional regulator, AraC family. | 0.404 |
| SFG92863.1 | SFG68940.1 | SAMN05660649_03172 | SAMN05660649_02364 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | AraC family transcriptional regulator. | 0.558 |
| SFG92863.1 | SFH00253.1 | SAMN05660649_03172 | SAMN05660649_03485 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Helix-turn-helix domain-containing protein. | 0.616 |
| SFG92863.1 | SFH29104.1 | SAMN05660649_03172 | SAMN05660649_04601 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | AraC family transcriptional regulator. | 0.401 |
| SFG92863.1 | sigA | SAMN05660649_03172 | SAMN05660649_03947 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.686 |
| SFH00253.1 | SFG06514.1 | SAMN05660649_03485 | SAMN05660649_00538 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, AraC family. | 0.586 |
| SFH00253.1 | SFG54816.1 | SAMN05660649_03485 | SAMN05660649_01943 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, AraC family. | 0.644 |
| SFH00253.1 | SFG68940.1 | SAMN05660649_03485 | SAMN05660649_02364 | Helix-turn-helix domain-containing protein. | AraC family transcriptional regulator. | 0.663 |
| SFH00253.1 | SFG92863.1 | SAMN05660649_03485 | SAMN05660649_03172 | Helix-turn-helix domain-containing protein. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.616 |
| SFH00253.1 | SFH00273.1 | SAMN05660649_03485 | SAMN05660649_03486 | Helix-turn-helix domain-containing protein. | Transglutaminase-like superfamily protein. | 0.606 |
| SFH00253.1 | SFH08874.1 | SAMN05660649_03485 | SAMN05660649_03797 | Helix-turn-helix domain-containing protein. | AraC family transcriptional regulator. | 0.618 |
| SFH00253.1 | SFH29072.1 | SAMN05660649_03485 | SAMN05660649_04599 | Helix-turn-helix domain-containing protein. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.625 |
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