STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH00457.1HD domain-containing protein. (168 aa)    
Predicted Functional Partners:
SFG23117.1
Nitrogen regulatory protein P-II family.
   
 0.841
SFG23135.1
Nitrogen regulatory protein P-II family.
   
 0.841
SFG40927.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
   
 0.841
SFG70467.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
   
 0.841
SFG70895.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
   
 0.841
SFH00475.1
Dihydropteroate synthase.
 
   
 0.840
SFH00491.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
     0.813
SFH00509.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
 
     0.784
SFH00438.1
Hypothetical protein.
       0.773
SFF94475.1
tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
  
  0.668
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.