STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH02861.1Altronate dehydratase. (200 aa)    
Predicted Functional Partners:
SFH02843.1
(2R)-sulfolactate sulfo-lyase subunit beta.
 
  
  0.978
SFH02908.1
Altronate dehydratase large subunit.
 
  
  0.931
SFH27341.1
(2R)-sulfolactate sulfo-lyase subunit beta.
 
  
  0.908
SFH27448.1
Altronate dehydratase large subunit.
 
  
  0.903
SFG87087.1
Ribose-5-phosphate isomerase.
     
 0.741
SFH24594.1
D-altronate dehydratase.
 
  
 
0.703
SFH24671.1
2-dehydro-3-deoxygluconokinase.
    
 0.672
SFH02825.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.598
SFH02889.1
Hypothetical protein.
       0.519
SFH02804.1
acyl-CoA thioesterase.
       0.453
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.