STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH02889.1Hypothetical protein. (481 aa)    
Predicted Functional Partners:
SFG54714.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.605
SFH02843.1
(2R)-sulfolactate sulfo-lyase subunit beta.
       0.519
SFH02861.1
Altronate dehydratase.
       0.519
SFG89471.1
Predicted nucleotidyltransferase.
  
     0.496
SFG07822.1
LysM domain-containing protein.
  
     0.468
SFH02908.1
Altronate dehydratase large subunit.
       0.445
SFH25582.1
Putative zinc-finger.
  
     0.440
SFH02804.1
acyl-CoA thioesterase.
 
     0.435
SFH02928.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.423
SFH11941.1
NHLM bacteriocin system secretion protein.
  
     0.418
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.