STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH06030.1PAS domain S-box-containing protein. (571 aa)    
Predicted Functional Partners:
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.827
SFG62524.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.808
SFH07394.1
Predicted ATPase.
   
 0.805
SFH12161.1
Predicted ATPase.
    
 0.805
SFH06046.1
Mut7-C ubiquitin.
       0.773
SFG09552.1
PAS domain S-box-containing protein.
   
 0.657
SFH39067.1
PAS domain S-box-containing protein.
    
 0.657
SFG84847.1
PAS domain S-box-containing protein.
    
 0.623
SFG75550.1
Signal transduction histidine kinase.
     
 0.591
SFH06014.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
       0.543
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.