STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH06123.1Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (526 aa)    
Predicted Functional Partners:
SFH07394.1
Predicted ATPase.
  
 
 0.745
SFH12161.1
Predicted ATPase.
  
 
 0.745
SFG93640.1
L-proline dehydrogenase.
  
  
 0.739
SFH06111.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.628
SFG12404.1
Iron-sulfur cluster-binding protein.
   
    0.587
SFH39067.1
PAS domain S-box-containing protein.
  
 
 0.586
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
  
 0.570
SFH06137.1
Agmatinase; Belongs to the arginase family.
  
  
 0.546
SFG39215.1
Carbon starvation protein CstA.
  
    0.539
SFG72234.1
Carbon starvation protein.
  
    0.539
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.