STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH06611.1S-layer homology domain-containing protein. (514 aa)    
Predicted Functional Partners:
SFH06626.1
S-layer homology domain-containing protein.
 
   
 0.877
SFG63142.1
S-layer homology domain-containing protein.
 
 0.870
SFH06597.1
SCP-2 sterol transfer family protein.
 
     0.855
SFH34099.1
Copper amine oxidase N-terminal domain-containing protein.
 
 
 0.834
SFF97605.1
Copper amine oxidase N-terminal domain-containing protein.
 
 
 0.823
SFH17775.1
S-layer homology domain-containing protein.
  
  
  0.811
SFG16436.1
Copper amine oxidase N-terminal domain-containing protein.
 
  
 0.795
SFH07035.1
Copper amine oxidase N-terminal domain-containing protein.
  
  
 0.783
SFH06424.1
SCP-2 sterol transfer family protein.
  
  
 0.780
SFH07217.1
Polysaccharide pyruvyl transferase CsaB.
 
     0.775
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.