STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH08714.1Sirohydrochlorin cobaltochelatase. (272 aa)    
Predicted Functional Partners:
SFG44499.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
SFG44546.1
Cobalt-precorrin 5A acetaldehyde-lyase.
 
 
 0.990
SFG44523.1
Cobalt-precorrin 4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 0.989
SFG44568.1
Cobalt-precorrin 3 C17-methyltransferase.
 
 
 0.979
cbiD
Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.958
SFG44588.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.948
SFF98065.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.944
SFG01835.1
uroporphyrinogen-III synthase.
 
 0.932
SFG01784.1
Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
  
 0.918
SFG44469.1
Cobalt-precorrin 7 C15-methyltransferase.
 
  
 0.903
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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