STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH09123.1Alanine dehydrogenase; Belongs to the AlaDH/PNT family. (382 aa)    
Predicted Functional Partners:
SFH09141.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.980
nadE-2
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.754
SFG97465.1
Aspartate aminotransferase.
     
 0.744
SFH02617.1
Ornithine cyclodeaminase.
    
  0.641
SFF98751.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
    
  0.539
SFG36249.1
Aspartate aminotransferase.
     
 0.532
SFG47861.1
Aspartate aminotransferase.
     
 0.532
SFG87715.1
Aminotransferase.
     
 0.532
SFH17747.1
Aspartate aminotransferase.
     
 0.532
SFH30303.1
Aspartate/methionine/tyrosine aminotransferase.
     
 0.532
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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