STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH10519.1Restriction endonuclease. (282 aa)    
Predicted Functional Partners:
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.920
SFH12146.1
Adenylate cyclase.
    
  0.790
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.787
SFG75550.1
Signal transduction histidine kinase.
  
 
 0.663
SFH10503.1
Putative restriction endonuclease.
       0.651
SFH07394.1
Predicted ATPase.
  
 
 0.612
SFH12161.1
Predicted ATPase.
  
 
 0.612
SFG55373.1
Signal transduction histidine kinase.
   
 
  0.603
SFG36775.1
FHA domain-containing protein.
  
  
 0.595
SFG36800.1
FHA domain-containing protein.
  
  
 0.595
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.