STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH11999.1Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
SFG88438.1
Six-cysteine peptide SCIFF.
 
 
 
 0.908
SFH40692.1
Hypothetical protein.
  
 
 0.851
SFG00528.1
Hypothetical protein.
  
 
 0.797
SFH11982.1
NHLP leader peptide domain-containing protein.
       0.693
SFH12017.1
Acetyltransferase (GNAT) family protein.
       0.655
SFG13365.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
 
   
 0.644
SFH22916.1
Putative phage tail component, N-terminal domain-containing protein.
  
     0.480
SFH12035.1
Peptidase family S41.
       0.435
SFH39977.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
  
     0.429
SFG89356.1
Right handed beta helix region.
  
     0.428
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.