STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH14054.1Oxaloacetate decarboxylase, beta subunit. (306 aa)    
Predicted Functional Partners:
SFF93463.1
Oxaloacetate decarboxylase, alpha subunit.
 
 
 0.975
SFG45994.1
Oxaloacetate decarboxylase, alpha subunit.
 
 
 0.863
SFH41256.1
Na+-transporting oxaloacetate decarboxylase beta subunit.
 
     0.795
SFF97314.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.770
SFH14071.1
Oxaloacetate decarboxylase, gamma chain.
       0.697
SFG25043.1
Phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
    
 0.673
SFG68963.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
    
 0.668
SFH14174.1
Acetyl-CoA carboxylase, carboxyltransferase component.
    
 0.642
SFH14159.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.638
SFH02971.1
NADPH-dependent glutamate synthase beta chain.
    
  0.636
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.