STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH14861.1Hypothetical protein. (670 aa)    
Predicted Functional Partners:
SFG24511.1
Squalene-hopene cyclase C-terminal domain-containing protein.
   
 
 0.887
SFG56837.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
   
 
 0.887
SFG57000.1
Prenyltransferase and squalene oxidase repeat-containing protein.
   
 
 0.887
SFH14842.1
Serpin B; Belongs to the serpin family.
       0.693
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
  
 0.604
SFG40184.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.581
SFG82371.1
Peptidase S24-like.
  
  
 0.581
SFH25497.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.581
SFG62524.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
   
    0.514
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
    0.495
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.