STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH15043.12TM domain-containing protein. (69 aa)    
Predicted Functional Partners:
SFH15060.1
Transcriptional regulator, PaaX family.
       0.661
SFG09912.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
    
 0.659
SFG78285.1
Histidine kinase.
    
 0.648
SFH15080.1
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
       0.592
SFG00247.1
Two component transcriptional regulator, LytTR family.
  
 0.588
SFG15371.1
Two component transcriptional regulator, LytTR family.
  
 0.588
SFG22196.1
Two component transcriptional regulator, LytTR family.
  
 0.588
SFG35692.1
Two component transcriptional regulator, LytTR family.
  
 0.588
SFG39244.1
Two component transcriptional regulator, LytTR family.
  
 0.588
SFG56979.1
LytTr DNA-binding domain-containing protein.
  
 0.588
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.