STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH15361.1HAMP domain-containing protein. (491 aa)    
Predicted Functional Partners:
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.970
SFH07394.1
Predicted ATPase.
  
 0.964
SFH12161.1
Predicted ATPase.
 
 
0.964
SFH15345.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.960
SFG83208.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.942
SFG75550.1
Signal transduction histidine kinase.
 
0.925
SFG84548.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.906
SFG06116.1
Two component transcriptional regulator, winged helix family.
 0.903
SFG56393.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.901
SFG72308.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 0.889
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.