STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH17427.1Putative iron-only hydrogenase system regulator. (88 aa)    
Predicted Functional Partners:
SFF92860.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.850
SFF98673.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.850
SFG93784.1
mRNA interferase MazF.
  
 
 0.850
SFG70113.1
Putative iron-only hydrogenase system regulator.
 
   
 0.717
SFH17448.1
Hypothetical protein.
       0.709
SFH17469.1
ADP-ribosyl-[dinitrogen reductase] hydrolase.
       0.641
SFH17491.1
Hypothetical protein.
       0.641
SFH17399.1
Hypothetical protein.
       0.528
SFH17510.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
       0.520
SFH38595.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein small subunit precursor /acetyl-CoA decarbonylase/synthase delta subunit.
     
 0.485
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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