STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH18024.1Phosphosulfolactate synthase. (273 aa)    
Predicted Functional Partners:
SFF95194.1
2-phosphosulfolactate phosphatase; Belongs to the ComB family.
 
 
 0.990
SFG77736.1
Iron only hydrogenase large subunit, C-terminal domain.
  
    0.845
SFG69209.1
Hydrogenase nickel incorporation protein HypB.
  
    0.809
SFH28051.1
Hydrogenase nickel incorporation protein HypB.
  
    0.809
topA
DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
   
    0.791
SFG98465.1
DNA topoisomerase-3.
   
    0.791
SFH18004.1
Uncharacterized membrane protein, DUF441 family.
 
     0.791
SFH18248.1
Protein of unknown function.
 
     0.751
SFH18230.1
MFS transporter, ACDE family, multidrug resistance protein.
 
     0.682
SFF98213.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
   
    0.591
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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