STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH23184.1Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein. (570 aa)    
Predicted Functional Partners:
SFH23270.1
Putative amidoligase enzyme.
 
     0.818
SFH22898.1
Phage minor structural protein, N-terminal region.
 
     0.790
SFG89356.1
Right handed beta helix region.
 
   
 0.786
SFH22916.1
Putative phage tail component, N-terminal domain-containing protein.
 
     0.779
SFH23162.1
Phage portal protein, SPP1 Gp6-like.
  
    0.774
SFH22706.1
Toprim-like.
  
     0.773
SFH22479.1
Ribonucleoside-triphosphate reductase.
 
     0.770
SFH22770.1
DNA replication protein DnaC.
 
     0.759
SFH22756.1
Replicative DNA helicase.
 
     0.758
SFH23140.1
Phage minor capsid protein 2.
       0.756
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.