STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH25091.1Small, acid-soluble spore protein, alpha/beta type. (89 aa)    
Predicted Functional Partners:
SFG38919.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.677
SFH25060.1
AbrB family transcriptional regulator, stage V sporulation protein T.
 
     0.666
SFG65625.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.652
SFG08229.1
Spore germination protein KA.
  
   
 0.597
SFH11798.1
Spore germination protein KA.
  
   
 0.596
SFG65985.1
AbrB family transcriptional regulator, stage V sporulation protein T.
  
     0.526
SFG66307.1
AbrB family transcriptional regulator, stage V sporulation protein T.
  
     0.516
SFH06472.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
  
 0.507
SFH25072.1
Hypothetical protein.
       0.497
SFF93850.1
Stage IV sporulation protein B.
  
     0.495
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.