STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH27035.1Formate C-acetyltransferase. (826 aa)    
Predicted Functional Partners:
SFH27049.1
Pyruvate formate lyase activating enzyme.
 
 0.982
SFG44902.1
Pyruvate formate lyase activating enzyme.
  
 0.946
SFG93335.1
Pyruvate formate lyase activating enzyme.
  
 0.944
SFG63128.1
Pyruvate formate lyase activating enzyme.
 
  
 0.898
SFF97314.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.864
SFG70918.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 
 0.829
SFG77759.1
NADH-quinone oxidoreductase subunit G.
     
 0.800
SFF93463.1
Oxaloacetate decarboxylase, alpha subunit.
     
 0.776
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 
 0.766
SFG68963.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
   
 
 0.732
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.