STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH27897.1Hypothetical protein. (396 aa)    
Predicted Functional Partners:
SFH27914.1
Hypothetical protein.
 
     0.899
SFG27006.1
Hypothetical protein.
 
     0.778
SFG26970.1
Hypothetical protein.
  
     0.762
SFG88066.1
Dissimilatory sulfite reductase D (DsrD).
  
     0.746
SFH43280.1
CBS domain-containing protein.
  
     0.739
SFH25072.1
Hypothetical protein.
  
     0.731
SFG26644.1
Dissimilatory adenylylsulfate reductase beta subunit.
 
     0.694
SFG01657.1
Hypothetical protein.
  
     0.677
SFG88096.1
Dissimilatory sulfite reductase beta subunit.
  
     0.673
SFG88116.1
Dissimilatory sulfite reductase alpha subunit.
  
     0.668
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.