STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH28897.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
SFH28880.1
Peptidase family M23.
       0.773
SFH28916.1
Transcriptional regulator, TetR family.
       0.773
SFH17343.1
Hypothetical protein.
  
     0.527
SFG98398.1
Hypothetical protein.
  
     0.523
SFH16977.1
Hypothetical protein.
 
     0.493
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 
 0.478
SFH02405.1
Hypothetical protein.
    
 0.466
SFH28862.1
ABC transporter.
  
    0.460
SFH35869.1
Predicted oxidoreductase.
  
 
  0.433
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.