Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFF93871.1 | SFF94307.1 | SAMN05660649_00097 | SAMN05660649_00118 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.881 |
| SFF93871.1 | SFF94365.1 | SAMN05660649_00097 | SAMN05660649_00121 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Stage V sporulation protein AF. | 0.703 |
| SFF93871.1 | SFF97451.1 | SAMN05660649_00097 | SAMN05660649_00283 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.867 |
| SFF93871.1 | SFG09170.1 | SAMN05660649_00097 | SAMN05660649_00641 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Spore germination protein KA. | 0.700 |
| SFF93871.1 | SFH29315.1 | SAMN05660649_00097 | SAMN05660649_04612 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Stage V sporulation protein AE. | 0.729 |
| SFF93871.1 | SFH29330.1 | SAMN05660649_00097 | SAMN05660649_04613 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Stage V sporulation protein AD. | 0.848 |
| SFF93871.1 | SFH29347.1 | SAMN05660649_00097 | SAMN05660649_04614 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Stage V sporulation protein AC. | 0.719 |
| SFF93871.1 | gpr | SAMN05660649_00097 | SAMN05660649_01527 | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.856 |
| SFF94307.1 | SFF93871.1 | SAMN05660649_00118 | SAMN05660649_00097 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.881 |
| SFF94307.1 | SFF94365.1 | SAMN05660649_00118 | SAMN05660649_00121 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AF. | 0.819 |
| SFF94307.1 | SFG09170.1 | SAMN05660649_00118 | SAMN05660649_00641 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore germination protein KA. | 0.722 |
| SFF94307.1 | SFH29315.1 | SAMN05660649_00118 | SAMN05660649_04612 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AE. | 0.802 |
| SFF94307.1 | SFH29330.1 | SAMN05660649_00118 | SAMN05660649_04613 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AD. | 0.819 |
| SFF94307.1 | SFH29347.1 | SAMN05660649_00118 | SAMN05660649_04614 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AC. | 0.799 |
| SFF94307.1 | gpr | SAMN05660649_00118 | SAMN05660649_01527 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.763 |
| SFF94365.1 | SFF93871.1 | SAMN05660649_00121 | SAMN05660649_00097 | Stage V sporulation protein AF. | Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.703 |
| SFF94365.1 | SFF94307.1 | SAMN05660649_00121 | SAMN05660649_00118 | Stage V sporulation protein AF. | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.819 |
| SFF94365.1 | SFF97451.1 | SAMN05660649_00121 | SAMN05660649_00283 | Stage V sporulation protein AF. | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.773 |
| SFF94365.1 | SFH29315.1 | SAMN05660649_00121 | SAMN05660649_04612 | Stage V sporulation protein AF. | Stage V sporulation protein AE. | 0.880 |
| SFF94365.1 | SFH29330.1 | SAMN05660649_00121 | SAMN05660649_04613 | Stage V sporulation protein AF. | Stage V sporulation protein AD. | 0.898 |
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