STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH29399.1Protein of unknown function. (69 aa)    
Predicted Functional Partners:
SFH29367.1
Uncharacterized membrane protein YcaP, DUF421 family.
 
     0.886
SFH29347.1
Stage V sporulation protein AC.
 
     0.849
SFH29330.1
Stage V sporulation protein AD.
 
     0.788
SFG48047.1
Sporulation protein YtrH.
  
     0.744
SFH29315.1
Stage V sporulation protein AE.
 
     0.729
SFH02555.1
Protein of unknown function.
  
     0.676
SFF94136.1
Stage II sporulation protein M.
  
     0.612
SFF93095.1
Protein of unknown function.
  
    0.591
SFH29383.1
Protein of unknown function.
 
    
0.587
SFH06217.1
Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter.
  
     0.586
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.