STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH31345.1PrgI family protein. (121 aa)    
Predicted Functional Partners:
SFH31368.1
Type IV secretory pathway, VirB4 component.
 
     0.950
SFH31264.1
Hypothetical protein.
   
 0.906
SFH31205.1
Type IV secretion system protein VirD4.
 
  
 0.816
SFH31224.1
Hypothetical protein.
 
     0.798
SFH31126.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
   
 0.795
SFH28933.1
Hypothetical protein.
 
     0.791
SFH31165.1
Hypothetical protein.
 
     0.790
SFH36973.1
Protein of unknown function.
 
   
 0.790
SFH31143.1
Protein of unknown function.
 
     0.789
SFH31104.1
Mobilisation protein (MobC).
 
     0.788
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.