STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH32307.1Competence protein ComEA. (219 aa)    
Predicted Functional Partners:
SFH32474.1
Competence protein ComEC.
 
  
 0.857
SFF92559.1
Type IV pilus assembly protein PilC.
  
  
 0.827
SFF92735.1
Type IV pilus assembly protein PilC.
  
  
 0.827
SFF92980.1
Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.821
SFF92828.1
N-terminal methylation site-containing protein.
   
  
 0.811
SFG90157.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
 
  
 0.774
SFF92544.1
Type II/IV secretion system protein.
  
  
 0.751
SFF92706.1
Type II secretion system protein E (GspE).
  
  
 0.751
SFH36192.1
Type II secretion system (T2SS), protein E, N-terminal domain.
  
  
 0.751
SFH29836.1
Competence protein ComEC.
 
  
 0.727
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.