STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH33798.1Hypothetical protein. (411 aa)    
Predicted Functional Partners:
SFH33760.1
Hypothetical protein.
   
 0.756
SFF98502.1
Hypothetical protein.
    
 
 0.738
SFG23713.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.700
SFG48773.1
DNA translocase FtsK.
    
 
 0.700
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
 
 0.647
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.628
SFG22018.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 0.619
SFG88497.1
Serine protease AprX; Belongs to the peptidase S8 family.
  
 0.619
SFH06501.1
S-layer homology domain-containing protein.
  
 0.619
SFH12095.1
S-layer homology domain-containing protein.
  
 0.619
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.