STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH34039.1TadE-like protein. (144 aa)    
Predicted Functional Partners:
SFH34273.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
  
  
 0.825
SFH34058.1
TadE-like protein.
       0.773
SFH34293.1
Flp pilus assembly protein CpaB.
  
  
 0.743
SFH37122.1
SAF domain-containing protein.
  
  
 0.743
SFH34016.1
Putative Flp pilus-assembly TadE/G-like.
       0.714
SFH33977.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.661
SFH33914.1
Type II secretion system (T2SS), protein F.
  
  
 0.643
SFH33936.1
Flp pilus assembly protein TadB.
  
  
 0.643
SFH34241.1
Flp pilus assembly protein TadB.
  
  
 0.643
SFH34226.1
Type II secretion system (T2SS), protein F.
  
    0.635
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.