STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH34378.1AAA-like domain-containing protein. (632 aa)    
Predicted Functional Partners:
SFH34326.1
Transglycosylase SLT domain-containing protein.
 
     0.888
SFH34397.1
Hypothetical protein.
  
  
 0.877
SFH34360.1
Hypothetical protein.
       0.797
SFF97503.1
AAA-like domain-containing protein.
 
  
 0.776
SFH34342.1
Hypothetical protein.
       0.773
SFH34414.1
PrgI family protein.
       0.773
SFH34431.1
Hypothetical protein.
       0.773
SFH33561.1
Type IV secretory system Conjugative DNA transfer.
 
  
 0.769
SFH34466.1
Hypothetical protein.
 
     0.768
SFH34255.1
Pilus assembly protein CpaF.
    
 0.757
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.