STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutI-2Imidazolonepropionase. (424 aa)    
Predicted Functional Partners:
SFH39904.1
Urocanase.
 
 
 0.990
SFG30403.1
Urocanase.
 
 
 0.980
hutH
Histidine ammonia-lyase.
 
  
 0.969
SFG58867.1
Urocanate hydratase.
 
 
 0.942
SFH39937.1
Glutamate formiminotransferase.
 
 
  0.933
SFH06137.1
Agmatinase; Belongs to the arginase family.
 
 
 0.827
SFH39919.1
Formiminotetrahydrofolate cyclodeaminase.
  
 
  0.814
SFG30334.1
Glutamate formiminotransferase.
 
 
  0.719
SFH16011.1
Arginase; Belongs to the arginase family.
  
 
 0.675
mtaD
5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
    
0.526
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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