STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH40578.1Thioredoxin reductase (NADPH). (40 aa)    
Predicted Functional Partners:
SFH18490.1
Biotin-requiring enzyme.
  
 0.960
SFH18511.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.960
SFH18528.1
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
  
 0.960
SFG63327.1
Thioredoxin reductase (NADPH).
  
0.957
SFG70748.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.949
SFG70779.1
AhpC/TSA family protein.
  
 
 0.949
SFH11406.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 0.911
SFH37720.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.906
SFH07394.1
Predicted ATPase.
  
 0.902
SFH12161.1
Predicted ATPase.
  
 0.902
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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