Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH40925.1 | SFH40943.1 | SAMN05660649_05102 | SAMN05660649_05103 | AraC family transcriptional regulator. | Hypothetical protein. | 0.773 |
SFH40925.1 | SFH40962.1 | SAMN05660649_05102 | SAMN05660649_05104 | AraC family transcriptional regulator. | MoxR-like ATPase. | 0.775 |
SFH40925.1 | SFH40979.1 | SAMN05660649_05102 | SAMN05660649_05105 | AraC family transcriptional regulator. | Protein of unknown function DUF58. | 0.773 |
SFH40925.1 | SFH40999.1 | SAMN05660649_05102 | SAMN05660649_05106 | AraC family transcriptional regulator. | Hypothetical protein. | 0.773 |
SFH40925.1 | SFH41013.1 | SAMN05660649_05102 | SAMN05660649_05107 | AraC family transcriptional regulator. | Protein of unknown function. | 0.773 |
SFH40925.1 | rpoA | SAMN05660649_05102 | SAMN05660649_03312 | AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.923 |
SFH40925.1 | rpoB | SAMN05660649_05102 | SAMN05660649_05058 | AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.871 |
SFH40925.1 | rpoC | SAMN05660649_05102 | SAMN05660649_05059 | AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.859 |
SFH40925.1 | rpoZ | SAMN05660649_05102 | SAMN05660649_01424 | AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.859 |
SFH40925.1 | sigA | SAMN05660649_05102 | SAMN05660649_03947 | AraC family transcriptional regulator. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.874 |
SFH40943.1 | SFH40925.1 | SAMN05660649_05103 | SAMN05660649_05102 | Hypothetical protein. | AraC family transcriptional regulator. | 0.773 |
SFH40943.1 | SFH40962.1 | SAMN05660649_05103 | SAMN05660649_05104 | Hypothetical protein. | MoxR-like ATPase. | 0.773 |
SFH40943.1 | SFH40979.1 | SAMN05660649_05103 | SAMN05660649_05105 | Hypothetical protein. | Protein of unknown function DUF58. | 0.773 |
SFH40943.1 | SFH40999.1 | SAMN05660649_05103 | SAMN05660649_05106 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFH40943.1 | SFH41013.1 | SAMN05660649_05103 | SAMN05660649_05107 | Hypothetical protein. | Protein of unknown function. | 0.773 |
SFH40962.1 | SFH40925.1 | SAMN05660649_05104 | SAMN05660649_05102 | MoxR-like ATPase. | AraC family transcriptional regulator. | 0.775 |
SFH40962.1 | SFH40943.1 | SAMN05660649_05104 | SAMN05660649_05103 | MoxR-like ATPase. | Hypothetical protein. | 0.773 |
SFH40962.1 | SFH40979.1 | SAMN05660649_05104 | SAMN05660649_05105 | MoxR-like ATPase. | Protein of unknown function DUF58. | 0.867 |
SFH40962.1 | SFH40999.1 | SAMN05660649_05104 | SAMN05660649_05106 | MoxR-like ATPase. | Hypothetical protein. | 0.773 |
SFH40962.1 | SFH41013.1 | SAMN05660649_05104 | SAMN05660649_05107 | MoxR-like ATPase. | Protein of unknown function. | 0.773 |
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