STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH41644.1DNA-binding transcriptional regulator, MarR family. (153 aa)    
Predicted Functional Partners:
SFH41658.1
Hypothetical protein.
 
     0.662
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
  
 0.613
SFG93747.1
ATP-dependent helicase Lhr and Lhr-like helicase.
  
    0.574
SFG10566.1
Sirohydrochlorin ferrochelatase.
  
     0.567
SFH41680.1
Hypothetical protein.
       0.562
SFG94326.1
Repeat domain-containing protein.
  
     0.485
SFG79217.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
  
 0.477
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.474
SFH21478.1
Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein.
  
     0.468
SFH27833.1
Transcriptional regulator, TetR family.
  
     0.468
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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