Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF94745.1 | SFG14133.1 | SAMN05660649_00143 | SAMN05660649_00844 | Prephenate dehydrogenase. | TRSP domain C terminus to PRTase_2. | 0.760 |
SFF94745.1 | SFG61820.1 | SAMN05660649_00143 | SAMN05660649_02131 | Prephenate dehydrogenase. | comF family protein. | 0.838 |
SFF94745.1 | SFH42880.1 | SAMN05660649_00143 | SAMN05660649_05171 | Prephenate dehydrogenase. | Hypothetical protein. | 0.495 |
SFF94745.1 | xpt | SAMN05660649_00143 | SAMN05660649_00461 | Prephenate dehydrogenase. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.815 |
SFG14133.1 | SFF94745.1 | SAMN05660649_00844 | SAMN05660649_00143 | TRSP domain C terminus to PRTase_2. | Prephenate dehydrogenase. | 0.760 |
SFG14133.1 | SFG61820.1 | SAMN05660649_00844 | SAMN05660649_02131 | TRSP domain C terminus to PRTase_2. | comF family protein. | 0.746 |
SFG14133.1 | SFH42880.1 | SAMN05660649_00844 | SAMN05660649_05171 | TRSP domain C terminus to PRTase_2. | Hypothetical protein. | 0.452 |
SFG61820.1 | SFF94745.1 | SAMN05660649_02131 | SAMN05660649_00143 | comF family protein. | Prephenate dehydrogenase. | 0.838 |
SFG61820.1 | SFG14133.1 | SAMN05660649_02131 | SAMN05660649_00844 | comF family protein. | TRSP domain C terminus to PRTase_2. | 0.746 |
SFG61820.1 | SFG81043.1 | SAMN05660649_02131 | SAMN05660649_02761 | comF family protein. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.478 |
SFG61820.1 | SFH42880.1 | SAMN05660649_02131 | SAMN05660649_05171 | comF family protein. | Hypothetical protein. | 0.504 |
SFG61820.1 | xpt | SAMN05660649_02131 | SAMN05660649_00461 | comF family protein. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.793 |
SFG81043.1 | SFG61820.1 | SAMN05660649_02761 | SAMN05660649_02131 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | comF family protein. | 0.478 |
SFG81043.1 | SFH42880.1 | SAMN05660649_02761 | SAMN05660649_05171 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | Hypothetical protein. | 0.472 |
SFH42880.1 | SFF94745.1 | SAMN05660649_05171 | SAMN05660649_00143 | Hypothetical protein. | Prephenate dehydrogenase. | 0.495 |
SFH42880.1 | SFG14133.1 | SAMN05660649_05171 | SAMN05660649_00844 | Hypothetical protein. | TRSP domain C terminus to PRTase_2. | 0.452 |
SFH42880.1 | SFG61820.1 | SAMN05660649_05171 | SAMN05660649_02131 | Hypothetical protein. | comF family protein. | 0.504 |
SFH42880.1 | SFG81043.1 | SAMN05660649_05171 | SAMN05660649_02761 | Hypothetical protein. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.472 |
SFH42880.1 | hslV | SAMN05660649_05171 | SAMN05660649_01853 | Hypothetical protein. | ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.530 |
SFH42880.1 | whiA | SAMN05660649_05171 | SAMN05660649_02164 | Hypothetical protein. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.472 |
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