STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S2ML56Uncharacterized protein. (806 aa)    
Predicted Functional Partners:
A0A4S2N3J3
RRM domain-containing protein.
    
 
 0.964
A0A4S2MSS5
CCHC-type domain-containing protein.
   
 
 0.958
A0A4S2N3N8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.946
A0A4S2N830
Uncharacterized protein.
    
 
 0.903
A0A4S2N1D8
mRNA capping enzyme, large subunit.
   
 
 0.894
A0A4S2MW37
Uncharacterized protein.
   
 
 0.842
A0A4S2MZ66
Uncharacterized protein.
   
 
 0.842
A0A4S2MLE1
Nuclear cap-binding protein subunit 2.
   
 
 0.820
A0A4S2N8T2
Uncharacterized protein.
   
 
 0.790
A0A4V3SIR7
Uncharacterized protein.
    
 
 0.766
Your Current Organism:
Ascodesmis nigricans
NCBI taxonomy Id: 341454
Other names: A. nigricans
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