STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S2MPG1Calponin-homology (CH) domain-containing protein. (216 aa)    
Predicted Functional Partners:
A0A4S2MU61
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.943
A0A4V3SHP3
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.943
A0A4S2MWH5
Calmodulin; Belongs to the calmodulin family.
   
 0.909
A0A4S2N0M7
EF-hand.
   
 0.909
A0A4S2N8I2
Uncharacterized protein.
    
   0.902
A0A4S2MT79
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.849
A0A4S2N4A5
Mis6-domain-containing protein.
   
 
 0.849
A0A4S2MHE2
Uncharacterized protein.
   
 
 0.848
A0A4S2MNW7
Actin/actin-like protein; Belongs to the actin family.
   
 0.837
A0A4S2MWP1
Actin, gamma.
   
 0.837
Your Current Organism:
Ascodesmis nigricans
NCBI taxonomy Id: 341454
Other names: A. nigricans
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