STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S2MRP6Myb-like domain-containing protein. (447 aa)    
Predicted Functional Partners:
A0A4S2N503
WD40 repeat-like protein.
   
 0.774
A0A4S2N4P5
Ribosomal protein S18.
    
   0.563
A0A4S2MS33
ATP-dependent metallopeptidase Hfl.
    
 
 0.539
A0A4S2N183
Translation protein.
    
 
 0.528
A0A4S2N6F1
Ribosomal protein L15.
    
 
 0.527
A0A4S2N866
Mitochondrial 40S ribosomal protein-like protein MRP2.
    
 
 0.521
A0A4S2N3P4
Nucleic acid-binding protein.
   
   0.515
A0A4S2N1K7
Uncharacterized protein.
   
   0.512
A0A4S2N472
HMA domain-containing protein.
    
   0.502
A0A4S2N884
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.501
Your Current Organism:
Ascodesmis nigricans
NCBI taxonomy Id: 341454
Other names: A. nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.