STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S2MVM4Uncharacterized protein. (1001 aa)    
Predicted Functional Partners:
A0A4S2MYX1
Serine/threonine-protein kinase.
   
 0.883
A0A4S2N5G4
Uncharacterized protein.
  
0.831
A0A4S2MI46
DNA-binding protein.
   
 0.822
A0A4S2MX95
Putative RAD54 protein.
  
0.822
A0A4S2MT08
PIN domain-like protein.
   
 0.821
A0A4S2N2B2
Actin/actin-like protein.
   
 0.790
A0A4S2N518
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.784
A0A4V6RHI2
DNA repair protein rad18.
   
 0.777
A0A4S2MZQ7
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.773
A0A4S2MXD4
WD40 repeat-like protein.
  
 0.764
Your Current Organism:
Ascodesmis nigricans
NCBI taxonomy Id: 341454
Other names: A. nigricans
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