STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S2N260C2H2-type domain-containing protein. (313 aa)    
Predicted Functional Partners:
A0A4S2N8I3
Uncharacterized protein.
    
 0.846
A0A4S2N6X3
RRM domain-containing protein.
   
   0.819
A0A4S2N4M0
Matrin-type domain-containing protein.
    
 
 0.798
A0A4S2N7Z9
Uncharacterized protein.
    
 
 0.796
A0A4S2N356
ARM repeat-containing protein.
    
   0.787
A0A4S2N5X2
CPSF_A domain-containing protein.
    
   0.787
A0A4S2N2V5
PRP38-domain-containing protein.
   
   0.779
A0A4S2N195
Uncharacterized protein.
   
   0.778
A0A4S2N4S3
WD40 repeat-like protein.
   
   0.767
A0A4S2MTE5
P-loop containing nucleoside triphosphate hydrolase protein.
    
   0.760
Your Current Organism:
Ascodesmis nigricans
NCBI taxonomy Id: 341454
Other names: A. nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.