A0A4S2N4J5 protein (Ascodesmis nigricans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S2N4J5

Uncharacterized protein. (217 aa)

Predicted Functional Partners:

A0A4S2N463

0.865

A0A4S2N6M7

0.790

A0A4S2N086

0.729

A0A4S2MJ60

0.709

A0A4S2N6E3

0.709

A0A4S2MWT1

0.688

A0A4S2N5G7

0.683

A0A4S2MWF7

0.671

A0A4S2N426

0.671

A0A4S2N5U8

0.671

Your Current Organism:

Ascodesmis nigricans

NCBI taxonomy Id: 341454
Other names: A. nigricans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S2MJ60	A0A4S2N4J5	Uncharacterized protein.	Uncharacterized protein.	0.709
A0A4S2MWF7	A0A4S2N463	Rad60-SLD_2 domain-containing protein.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.939
A0A4S2MWF7	A0A4S2N4J5	Rad60-SLD_2 domain-containing protein.	Uncharacterized protein.	0.671
A0A4S2MWF7	A0A4S2N5G7	Rad60-SLD_2 domain-containing protein.	Uncharacterized protein.	0.654
A0A4S2MWF7	A0A4S2N6E3	Rad60-SLD_2 domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.933
A0A4S2MWF7	A0A4S2N6M7	Rad60-SLD_2 domain-containing protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.903
A0A4S2MWT1	A0A4S2N4J5	Putative class V myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.688
A0A4S2MWT1	A0A4S2N5G7	Putative class V myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.983
A0A4S2N086	A0A4S2N4J5	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.729
A0A4S2N426	A0A4S2N463	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.939
A0A4S2N426	A0A4S2N4J5	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Uncharacterized protein.	0.671
A0A4S2N426	A0A4S2N5G7	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Uncharacterized protein.	0.654
A0A4S2N426	A0A4S2N6E3	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.933
A0A4S2N426	A0A4S2N6M7	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.903
A0A4S2N463	A0A4S2MWF7	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	Rad60-SLD_2 domain-containing protein.	0.939
A0A4S2N463	A0A4S2N426	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.939
A0A4S2N463	A0A4S2N4J5	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.865
A0A4S2N463	A0A4S2N5U8	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.973
A0A4S2N463	A0A4S2N6E3	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
A0A4S2N463	A0A4S2N6M7	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.995