STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V3SI75Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
A0A4S2MIK1
SPX domain-containing protein.
    
 0.869
A0A4S2MIW5
PLC-like phosphodiesterase.
    
 0.869
A0A4S2ML33
Ankyrin.
    
 0.791
A0A4S2MT19
DRIM domain-containing protein.
   
  0.681
A0A4S2MSY7
Nop domain-containing protein.
    
  0.677
A0A4S2MT68
NUC189-domain-containing protein.
    
 0.672
A0A4S2MX77
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.666
A0A4S2N7W8
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.666
A0A4S2N0V8
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.662
A0A4S2N1F1
U3 small nucleolar RNA associated protein.
    
  0.662
Your Current Organism:
Ascodesmis nigricans
NCBI taxonomy Id: 341454
Other names: A. nigricans
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