Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATEG_00350 | ATEG_01414 | Q0D134 | Q0CY20 | Quinate dehydrogenase. | MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.528 |
ATEG_00350 | ATEG_07785 | Q0D134 | Q0CEU9 | Quinate dehydrogenase. | Quinate permease; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.528 |
ATEG_00350 | ecm14 | Q0D134 | Q0C9B4 | Quinate dehydrogenase. | Putative metallocarboxypeptidase ecm14; Probable carboxypeptidase that may be involved in cell wall organization and biogenesis. | 0.528 |
ATEG_00350 | qutD | Q0D134 | Q0D135 | Quinate dehydrogenase. | Probable quinate permease; Integral membrane transporter that imports quinic acid to be catabolized as a carbon source; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.528 |
ATEG_00474 | ATEG_03179 | Q0D0R0 | Q0CT05 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | KEX1 protease. | 0.740 |
ATEG_00474 | ATEG_07595 | Q0D0R0 | Q0CFD9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.980 |
ATEG_00474 | ecm14 | Q0D0R0 | Q0C9B4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Putative metallocarboxypeptidase ecm14; Probable carboxypeptidase that may be involved in cell wall organization and biogenesis. | 0.866 |
ATEG_01414 | ATEG_00350 | Q0CY20 | Q0D134 | MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Quinate dehydrogenase. | 0.528 |
ATEG_01414 | ecm14 | Q0CY20 | Q0C9B4 | MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Putative metallocarboxypeptidase ecm14; Probable carboxypeptidase that may be involved in cell wall organization and biogenesis. | 0.519 |
ATEG_03179 | ATEG_00474 | Q0CT05 | Q0D0R0 | KEX1 protease. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.740 |
ATEG_03179 | ATEG_05749 | Q0CT05 | Q0CKN5 | KEX1 protease. | Peptidase S1 domain-containing protein. | 0.741 |
ATEG_03179 | ATEG_07595 | Q0CT05 | Q0CFD9 | KEX1 protease. | Uncharacterized protein. | 0.740 |
ATEG_03179 | ecm14 | Q0CT05 | Q0C9B4 | KEX1 protease. | Putative metallocarboxypeptidase ecm14; Probable carboxypeptidase that may be involved in cell wall organization and biogenesis. | 0.530 |
ATEG_04874 | ATEG_09722 | Q0CN60 | Q0C9B2 | GTP-binding protein ypt3. | Uncharacterized protein. | 0.667 |
ATEG_04874 | ecm14 | Q0CN60 | Q0C9B4 | GTP-binding protein ypt3. | Putative metallocarboxypeptidase ecm14; Probable carboxypeptidase that may be involved in cell wall organization and biogenesis. | 0.623 |
ATEG_05749 | ATEG_03179 | Q0CKN5 | Q0CT05 | Peptidase S1 domain-containing protein. | KEX1 protease. | 0.741 |
ATEG_05749 | ATEG_09722 | Q0CKN5 | Q0C9B2 | Peptidase S1 domain-containing protein. | Uncharacterized protein. | 0.604 |
ATEG_05749 | ecm14 | Q0CKN5 | Q0C9B4 | Peptidase S1 domain-containing protein. | Putative metallocarboxypeptidase ecm14; Probable carboxypeptidase that may be involved in cell wall organization and biogenesis. | 0.866 |
ATEG_07595 | ATEG_00474 | Q0CFD9 | Q0D0R0 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.980 |
ATEG_07595 | ATEG_03179 | Q0CFD9 | Q0CT05 | Uncharacterized protein. | KEX1 protease. | 0.740 |
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